Programming code is pure logic and has no opinions.

Can you explain to me how, for example, Stuxnet is apolitical?

All they do is permit/restrict specific rights to attribute, use, modify, reproduce, distribute, etc. the code.

Can you explain how these restrictions/permissions are apolitical?

Honestly I don’t understand this kind of argument. Linux is political: compare it to its alternatives, look at the license it’s released under, and so on. Lemmy is the same way. Lemmy even has a section in the manual about how it’s fundamentally political: https://join-lemmy.org/docs/en/users/07-history-of-lemmy.html